Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015918157.1_cds_XP_016467651.1_60377
CDS Infomation

[gene=LOC107790260] [db_xref=GeneID:107790260] [protein=(6-4)DNA photolyase-like] [protein_id=XP_016467651.1] [location=join(5557..5645,5985..6045,6165..6236,6406..6486,6677..6812,7797..7840,7907..7978,8112..8198,8280..8378,8452..8535,9086..9172,9284..9355,9437..9550,9911..9998,10078..10173,10716..10900)] [gbkey=CDS]
Sequence

ATGTCTCCTAATGGGCTTACATTTCTACAAGGGTCGTACAATTTCTACTTTTGCCTTACG
GTCGTCTCCCTCGGGACGCCGATTCAAAGAGTCAAACTGTTGATTGAATCCGCGCTATAT
CCTACGAAAGACACTGGTTCCTTTCAGGGGTGGAGCATAGGAAAGCTTTGCTTTGAGTAC
GACACGGAGCCCTACTATCAAGCTTTGGATGTAAAAGTCAAGAACCACGCTTCTGTAGCT
GGTGTAGAGATTTTCTCTCCTGTGAGTCACACCCTCTACAATCCTGCTGATATAATAAAT
AAGAATGGGGGATCCCCACCTCTGACTTATCAGTCTTTCCTTAAACTGGCTGGGCAACCA
TCTTGGGCATCAACCCCTCTTTCAACAACAATATCTTCTCTTCCTCCTATTGGAAATACT
GGAAATTTTGCGGTGTCAGGAGTTCCAACTGTCAAAGAACTTGGTTATGAAGATTTAAAC
GAGGACGAACGGACTCCTTTTAAAGGTGGAGAATCAGAAGCACTGAAGAGATTGAGAGAA
TCAATTGCAAACAAGGAATGGGTGGCAAATTTTGAGAAACCCAAGGGTGATCCATCTGCA
TTTATGAAACCAGCTACAACAGTTTTATCACCTTACTTAAAGTTTGGTTGTCTCTCTTCC
AGATATTTCTACCAGTGCATTCAGGACATTCAGAAAAGTGTTAAAAAGCATACATCTCCG
CCTGTTTCTCTTCTTGGACAGTTGTTATGGCGTGACTTTTTCTACACAGTTTCCTTCGGG
ACTCCTAATTTTGATCAGATGAAGGGTAACAGAATATGCAAGCAGATCCCTTGGAAGAAT
GATGACGAACTGCTTGCTGCTTGGAGAGATTCCAGAACGGGCTTTCCTTGGATTGATGCC
ATAATGGCCCAGCTCCGGAAATGTGGTTGGATGCACCATCTTGCTCGACACAGTGTTGCT
TGCTTTTTAACTCGTGGGGATCTGTTTGTGCATTGGGAGAAAGGGCGTGATGTTTTCGAT
AGACTGCTTATTGACTCTGATTGGGCAATCAACAACGGAAACTGGTTATGGCTATCATGC
TCTTCATTTTTCTACCAGTACCATCGAATTTATTCACCAACCTCATTTGGGAAGAAATAT
GATCCTGCCGGGAACTATATCAGGCATTTTCTCCCTGTTTTAAAGGATATGCCAAAGGAG
TACATATATGAGCCTTGGACTGCTCCCTTAAGCGTCCAGCGTAAAGCAAGATGCATCATT
GGCTTAGATTATCCAAACCCCGTTGTTTCCCATGATTCTGCAAGCAAAGAATGTCGGATG
AGACTTGGTGAAGCGTATGAATTGAACAAAAAGCTGAATGGCCGGGTCAGTGAGGAAGAC
TTGAACAAGTTAAGAAGAAAAAACGACAATGAATCTGCAATTGTGGATTCCATTTCCAGG
AAGAAGAAACAGAAGTTAATTTGCTAA

Peptide Sequence

PEP ID

XP_016467651.1
PEP Infomation

PREDICTED: (6-4)DNA photolyase-like [Nicotiana tabacum]
Sequence

MSPNGLTFLQGSYNFYFCLTVVSLGTPIQRVKLLIESALYPTKDTGSFQGWSIGKLCFEY
DTEPYYQALDVKVKNHASVAGVEIFSPVSHTLYNPADIINKNGGSPPLTYQSFLKLAGQP
SWASTPLSTTISSLPPIGNTGNFAVSGVPTVKELGYEDLNEDERTPFKGGESEALKRLRE
SIANKEWVANFEKPKGDPSAFMKPATTVLSPYLKFGCLSSRYFYQCIQDIQKSVKKHTSP
PVSLLGQLLWRDFFYTVSFGTPNFDQMKGNRICKQIPWKNDDELLAAWRDSRTGFPWIDA
IMAQLRKCGWMHHLARHSVACFLTRGDLFVHWEKGRDVFDRLLIDSDWAINNGNWLWLSC
SSFFYQYHRIYSPTSFGKKYDPAGNYIRHFLPVLKDMPKEYIYEPWTAPLSVQRKARCII
GLDYPNPVVSHDSASKECRMRLGEAYELNKKLNGRVSEEDLNKLRRKNDNESAIVDSISR
KKKQKLIC

Transcript Sequence

Gene sequence data has not been registered.